Influência do pastoreio nas aves do montado

Tese de mestrado. Biologia (Biologia da Conservação). Universidade de Lisboa, Faculdade de Ciências, 2012O montado é um sistema agro-silvo-pastoril que cobre cerca de 4 milhões de hectares na Península Ibérica e é o tipo de uso do solo mais importante no sul de Portugal. O coberto arbóreo é dominado por azinheiras (Quercus rotundifolia) e/ou sobreiros (Quercus suber) e a sua gestão tradicional baseia-se na agricultura extensiva e pecuária. Contudo, as práticas de gestão estão a mudar e, por isso, é crucial perceber como é que estas influenciam o montado e a sua avifauna, particularmente as espécies que se alimentam no solo. Os objectivos deste estudo são: (i) identificar as características do microhabitat que determinam a utilização por aves de locais de alimentação no solo; (ii) determinar o papel do pastoreio na definição dessas características; (iii) avaliar a influência do pastoreio na abundância de aves em alimentação no solo, e (iv) propor medidas de gestão do pastoreio no montado, de forma a preservar a diversidade de aves. Analisámos qual o efeito de três níveis de pastoreio por ovelhas – ausência, baixa e alta intensidade – nas aves que se alimentam no solo em 12 talhões. Efectuámos transectos de contagem de aves em alimentação no solo e utilizámos modelos lineares generalizados mistos para comparar as suas abundâncias nos vários talhões. Localizámos com precisão os locais de alimentação das aves e caracterizámo-los (altura da vegetação, número de invertebrados, excrementos e bolotas, e percentagens de solo nu, solo revolvido e folhas mortas). Utilizámos modelos logísticos condicionais para determinar quais as características seleccionadas pelas aves. Os resultados mostram que o pastoreio influencia o habitat ao nível do solo e os locais onde as aves se alimentam. Todas as espécies de aves alimentaram-se em locais em que a altura de vegetação era menor que a média e a maioria preferiu locais com maior abundância de invertebrados. Contudo, diferentes espécies tendem a alimentar-se em intensidades de pastoreio distintas e, por isso, é necessário manter um mosaico de regimes de pastoreio, para garantir a diversidade de aves e a sua integração com as actividades humanas do montado.Montado is an agro-silvo-pastoral system that covers about 4 million hectares of the Iberian Peninsula and is the most important land cover in southern Portugal. The tree cover is dominated by holm oaks (Quercus rotundifolia) and/or cork oaks (Quercus suber), and its traditional management involves low intensity agriculture and livestock grazing. Management practices are changing, so it is crucial to understand how they affect montado and its rich bird community, and in particular ground-foraging species. The objectives of our study were to (i) identify the characteristics of the sites chosen by ground-foraging birds; (ii) determine how grazing influences those characteristics; (iii) evaluate the effect of grazing on the abundance of ground-feeding birds, and (iv) propose grazing management strategies to preserve bird diversity in montado. We evaluated the effect of three levels of sheep grazing – no grazing, light and intensive grazing – on birds foraging activity in 12 fenced plots. We did transects to count foraging birds in those plots, and used generalized linear mixed models to compare abundances in the three grazing levels. In addition, we located with precision the sites where birds were observed feeding on the ground and characterized them (vegetation height, abundance of invertebrates, dung and acorns, percentage of bare ground, revolved soil and dead leaves). We used conditional logit models to determine which characteristics are preferred by feeding birds. The results demonstrated that grazing influences the characteristics of the ground level habitat and influences where birds forage. All ground-foraging bird species fed mostly where grassy vegetation height was lower than average and most preferred sites with higher invertebrate abundance. However, different species tend to choose different grazing intensities to forage. Therefore, it is important to maintain a mosaic of grazing regimes, to assure bird diversity and its integration with human activities in montado

Performance of GPS/GPRS tracking devices improves with increased fix interval and is not affected by animal deployment

The use of GPS tracking technologies has revolutionized the study of animal movement providing unprecedentedly detailed information. The characterization of GPS accuracy and precision under different conditions is essential to correctly identify the spatial and temporal resolution at which studies can be conducted. Here, we examined the influence of fix acquisition interval and device deployment on the performance of a new GPS/GSM solar powered device. Horizontal and vertical accuracy and precision of locations were obtained under different GPS fix acquisition intervals (1min, 20 min and 60 min) in a stationary test. The test devices were deployed on pre-fledgling white storks (Ciconia ciconia) and we quantified accuracy and precision after deployment while controlling for bias caused by variation in habitat, topography, and animal movement. We also assessed the performance of GPS-Error, a metric provided by the device, at identifying inaccurate locations (> 10 m). Average horizontal accuracy varied between 3.4 to 6.5 m, and vertical accuracy varied between 4.9 to 9.7 m, in high (1 min) and low frequency (60 min) GPS fix intervals. These values were similar after the deployment on white storks. Over 84% of GPS horizontal positions and 71% of vertical positions had less than 10m error in accuracy. Removing 3% of data with highest GPS-Error eliminated over 99% of inaccurate positions in high GPS frequency intervals, but this metric was not effective in the low frequency intervals. We confirmed the suitability of these devices for studies requiring horizontal and vertical accuracies of 5-10m. For higher accuracy data, intensive GPS fix intervals should be used, but this requires more sophisticated battery management, or larger batteries and devices

Changes in surface water drive the movements of Shoebills

Animal movement is mainly determined by spatial and temporal changes in resource availability. For wetland specialists, the seasonal availability of surface water may be a major determinant of their movement patterns. This study is the first to examine the movements of Shoebills (Balaeniceps rex), an iconic and vulnerable bird species. Using GPS transmitters deployed on six immature and one adult Shoebills over a 5-year period, during which four immatures matured into adults, we analyse their home ranges and distances moved in the Bangweulu Wetlands, Zambia. We relate their movements at the start of the rainy season (October to December) to changes in Normalized Difference Water Index (NDWI), a proxy for surface water. We show that Shoebills stay in the Bangweulu Wetlands all year round, moving less than 3 km per day on 81% of days. However, average annual home ranges were large, with high individual variability, but were similar between age classes. Immature and adult Shoebills responded differently to changes in surface water; sites that adults abandoned became drier, while sites abandoned by immatures became wetter. However, there were no differences in NDWI of areas used by Shoebills before abandonment and newly selected sites, suggesting that Shoebills select areas with similar surface water. We hypothesise that the different responses to changes in surface water by immature and adult Shoebills are related to age-specific optimal foraging conditions and fishing techniques. Our study highlights the need to understand the movements of Shoebills throughout their life cycle to design successful conservation actions for this emblematic, yet poorly known, species

Testing alternative methods for estimation of bird migration phenology from GPS tracking data

The development and miniaturization of GPS tracking devices has enabled a better understanding of migration phenology, but it can be challenging to identify where and when migration starts and ends, and researchers rely on multiple methods to infer it. Here, we use GPS tracks of 18 trans-Saharan migrant White Storks Ciconia ciconia to determine how the choice of method influences the estimation of migratory timing and discuss its implications. We evaluate and provide R code for the implementation of five alternative methods: spatial threshold, absolute displacement, spatio-temporal displacement, net squared displacement and change point analysis. Spatial threshold, absolute displacement and spatio-temporal displacement methods produce, in most cases, significantly different estimates of migration timing and duration as compared with net squared displacement and change point analysis

Antibiose de fungos do filoplano de plantas de arroz a Magnaporthe oryzae

A brusone nas folhas (Magnaporthe oryzae) causa perdas indiretas e significativas de produtividade. As folhas de arroz são habitadas por diversos micro-organismos, incluindo fungos não fitopatogênicos importantes para o controle biológico. Objetivando selecionar os fungos do filoplano de plantas de arroz, foi realizado um experimento de campo com a cultivar Aimoré em sistema orgânico implantado sob plantio direto e convencional com quatro coberturas (crotalária, guandu, sorgo e mucuna) e pousio em quatro repetições. Foram coletadas três folhas de arroz por parcela, 70 dias após o plantio, para quantificar os fungos presentes no filoplano. Do terço médio da folha foram retirados fragmentos de 5 cm e a superfície adaxial foi pressionada sobre o meio de cultura BDA. Após 72 h, avaliou-se o número de unidades formadoras de colônia.cm-2. A antibiose foi avaliada utilizando o método da cultura pareada. Foram identificados 15 fungos, dos quais, os mais frequentes no plantio direto foram Sporobolomyces sp., Phoma sp. e Fusarium sp., e no convencional, Sporobolomyces sp., Phoma sp., Penicillium sp. e Cephalosporium sp. O número de unidades formadoras de colônia.cm-2 foi significativamente maior no sistema plantio direto do que no convencional (P < 0,037). Dos 15 fungos identificados, Epicoccum sp. e Sporobolomyces sp. foram antagonistas a M. oryzae

Global burden of respiratory infections associated with seasonal influenza in children under 5 years in 2018: a systematic review and modelling study

Background: Seasonal influenza virus is a common cause of acute lower respiratory infection (ALRI) in young children. In 2008, we estimated that 20 million influenza-virus-associated ALRI and 1 million influenza-virus-associated severe ALRI occurred in children under 5 years globally. Despite this substantial burden, only a few low-income and middle-income countries have adopted routine influenza vaccination policies for children and, where present, these have achieved only low or unknown levels of vaccine uptake. Moreover, the influenza burden might have changed due to the emergence and circulation of influenza A/H1N1pdm09. We aimed to incorporate new data to update estimates of the global number of cases, hospital admissions, and mortality from influenza-virus-associated respiratory infections in children under 5 years in 2018. Methods: We estimated the regional and global burden of influenza-associated respiratory infections in children under 5 years from a systematic review of 100 studies published between Jan 1, 1995, and Dec 31, 2018, and a further 57 high-quality unpublished studies. We adapted the Newcastle-Ottawa Scale to assess the risk of bias. We estimated incidence and hospitalisation rates of influenza-virus-associated respiratory infections by severity, case ascertainment, region, and age. We estimated in-hospital deaths from influenza virus ALRI by combining hospital admissions and in-hospital case-fatality ratios of influenza virus ALRI. We estimated the upper bound of influenza virus-associated ALRI deaths based on the number of in-hospital deaths, US paediatric influenza-associated death data, and population-based childhood all-cause pneumonia mortality data in six sites in low-income and lower-middle-income countries. Findings: In 2018, among children under 5 years globally, there were an estimated 109·5 million influenza virus episodes (uncertainty range [UR] 63·1–190·6), 10·1 million influenza-virus-associated ALRI cases (6·8–15·1); 870 000 influenza-virus-associated ALRI hospital admissions (543 000–1 415 000), 15 300 in-hospital deaths (5800–43 800), and up to 34 800 (13 200–97 200) overall influenza-virus-associated ALRI deaths. Influenza virus accounted for 7% of ALRI cases, 5% of ALRI hospital admissions, and 4% of ALRI deaths in children under 5 years. About 23% of the hospital admissions and 36% of the in-hospital deaths were in infants under 6 months. About 82% of the in-hospital deaths occurred in low-income and lower-middle-income countries. Interpretation: A large proportion of the influenza-associated burden occurs among young infants and in low-income and lower middle-income countries. Our findings provide new and important evidence for maternal and paediatric influenza immunisation, and should inform future immunisation policy particularly in low-income and middle-income countries. Funding: WHO; Bill & Melinda Gates Foundation.Fil: Wang, Xin. University of Edinburgh; Reino UnidoFil: Li, You. University of Edinburgh; Reino UnidoFil: O'Brien, Katherine L.. University Johns Hopkins; Estados UnidosFil: Madhi, Shabir A.. University of the Witwatersrand; SudáfricaFil: Widdowson, Marc Alain. Centers for Disease Control and Prevention; Estados UnidosFil: Byass, Peter. Umea University; SueciaFil: Omer, Saad B.. Yale School Of Public Health; Estados UnidosFil: Abbas, Qalab. Aga Khan University; PakistánFil: Ali, Asad. Aga Khan University; PakistánFil: Amu, Alberta. Dodowa Health Research Centre; GhanaFil: Azziz-Baumgartner, Eduardo. Centers for Disease Control and Prevention; Estados UnidosFil: Bassat, Quique. University Of Barcelona; EspañaFil: Abdullah Brooks, W.. University Johns Hopkins; Estados UnidosFil: Chaves, Sandra S.. Centers for Disease Control and Prevention; Estados UnidosFil: Chung, Alexandria. University of Edinburgh; Reino UnidoFil: Cohen, Cheryl. National Institute For Communicable Diseases; SudáfricaFil: Echavarría, Marcela Silvia. Consejo Nacional de Investigaciones Científicas y Técnicas. Oficina de Coordinación Administrativa Parque Centenario. CEMIC-CONICET. Centro de Educaciones Médicas e Investigaciones Clínicas "Norberto Quirno". CEMIC-CONICET; ArgentinaFil: Fasce, Rodrigo A.. Public Health Institute; ChileFil: Gentile, Angela. Gobierno de la Ciudad de Buenos Aires. Hospital General de Niños "Ricardo Gutiérrez"; ArgentinaFil: Gordon, Aubree. University of Michigan; Estados UnidosFil: Groome, Michelle. University of the Witwatersrand; SudáfricaFil: Heikkinen, Terho. University Of Turku; FinlandiaFil: Hirve, Siddhivinayak. Kem Hospital Research Centre; IndiaFil: Jara, Jorge H.. Universidad del Valle de Guatemala; GuatemalaFil: Katz, Mark A.. Clalit Research Institute; IsraelFil: Khuri Bulos, Najwa. University Of Jordan School Of Medicine; JordaniaFil: Krishnan, Anand. All India Institute Of Medical Sciences; IndiaFil: de Leon, Oscar. Universidad del Valle de Guatemala; GuatemalaFil: Lucero, Marilla G.. Research Institute For Tropical Medicine; FilipinasFil: McCracken, John P.. Universidad del Valle de Guatemala; GuatemalaFil: Mira-Iglesias, Ainara. Fundación Para El Fomento de la Investigación Sanitaria; EspañaFil: Moïsi, Jennifer C.. Agence de Médecine Préventive; FranciaFil: Munywoki, Patrick K.. No especifíca;Fil: Ourohiré, Millogo. No especifíca;Fil: Polack, Fernando Pedro. Fundación para la Investigación en Infectología Infantil; ArgentinaFil: Rahi, Manveer. University of Edinburgh; Reino UnidoFil: Rasmussen, Zeba A.. National Institutes Of Health; Estados UnidosFil: Rath, Barbara A.. Vienna Vaccine Safety Initiative; AlemaniaFil: Saha, Samir K.. Child Health Research Foundation; BangladeshFil: Simões, Eric A.F.. University of Colorado; Estados UnidosFil: Sotomayor, Viviana. Ministerio de Salud de Santiago de Chile; ChileFil: Thamthitiwat, Somsak. Thailand Ministry Of Public Health; TailandiaFil: Treurnicht, Florette K.. University of the Witwatersrand; SudáfricaFil: Wamukoya, Marylene. African Population & Health Research Center; KeniaFil: Lay-Myint, Yoshida. Nagasaki University; JapónFil: Zar, Heather J.. University of Cape Town; SudáfricaFil: Campbell, Harry. University of Edinburgh; Reino UnidoFil: Nair, Harish. University of Edinburgh; Reino Unid

Hotspots in the grid: Avian sensitivity and vulnerability to collision risk from energy infrastructure interactions in Europe and North Africa

Wind turbines and power lines can cause bird mortality due to collision or electrocution. The biodiversity impacts of energy infrastructure (EI) can be minimised through effective landscape-scale planning and mitigation. The identification of high-vulnerability areas is urgently needed to assess potential cumulative impacts of EI while supporting the transition to zero carbon energy. We collected GPS location data from 1,454 birds from 27 species susceptible to collision within Europe and North Africa and identified areas where tracked birds are most at risk of colliding with existing EI. Sensitivity to EI development was estimated for wind turbines and power lines by calculating the proportion of GPS flight locations at heights where birds were at risk of collision and accounting for species' specific susceptibility to collision. We mapped the maximum collision sensitivity value obtained across all species, in each 5 × 5 km grid cell, across Europe and North Africa. Vulnerability to collision was obtained by overlaying the sensitivity surfaces with density of wind turbines and transmission power lines. Results: Exposure to risk varied across the 27 species, with some species flying consistently at heights where they risk collision. For areas with sufficient tracking data within Europe and North Africa, 13.6% of the area was classified as high sensitivity to wind turbines and 9.4% was classified as high sensitivity to transmission power lines. Sensitive areas were concentrated within important migratory corridors and along coastlines. Hotspots of vulnerability to collision with wind turbines and transmission power lines (2018 data) were scattered across the study region with highest concentrations occurring in central Europe, near the strait of Gibraltar and the Bosporus in Turkey. Synthesis and applications. We identify the areas of Europe and North Africa that are most sensitive for the specific populations of birds for which sufficient GPS tracking data at high spatial resolution were available. We also map vulnerability hotspots where mitigation at existing EI should be prioritised to reduce collision risks. As tracking data availability improves our method could be applied to more species and areas to help reduce bird-EI conflicts

Effects of gamma radiation on the stability and degradation kinetics of phenolic compounds and antioxidant activity during storage of (Oryza sativa L.) black rice flour

Abstract The effects of gamma radiation (0, 1, 2 and 3 kGy) were used to evaluate the stability and thermal degradation kinetics of anthocyanins, as well as the stability of total phenolic compounds (TPC) and antioxidant activity at different temperatures (4, 25, 35 and 45 °C) during the storage (0, 30, 60, 90 and 120 days) of black rice flour. This flour can be used as ingredient for gluten-free cereal products with higher nutritional value. For this it is necessary to preserve the anthocyanin content during thermal processing and shelf-life periods. At time 0, the dose of 3 kGy provided all of the most available bioactive compounds, raising their antioxidant potential, except for TPC. During the storage at different temperatures up to 120 days, gradual losses occurred in all the analysed parameters. Regarding the total anthocyanin content and TPC, the sample irradiated with a 1 kGy dose remained most stable. The analysis of kinetic data indicated a first-order reaction for the degradation of anthocyanins. The combination of irradiation with different temperatures may improve the shelf-life of black rice flour

Blunted dynamics of adenosine A2A receptors is associated with increased susceptibility to Candida albicans infection in the elderly

Opportunistic gut infections and chronic inflammation, in particular due to overgrowth of Candida albicans present in the gut microbiota, are increasingly reported in the elder population. In aged, adult and young mice, we now compared the relative intestinal over-colonization by ingested C. albicans and their translocation to other organs, focusing on the role of adenosine A2A receptors that are a main stop signal of inflammation. We report that elderly mice are more prone to over-colonization by C. albicans than adult and young mice. This fungal over-growth seems to be related with higher growth rate in intestinal lumen, independent of gut tissues invasion, but resulting in higher GI tract inflammation. We observed a particularly high colonization of the stomach, with increased rate of yeast-to-hypha transition in aged mice. We found a correlation between A2A receptor density and tissue damage due to yeast infection: comparing with young and adults, aged mice have a lower gut A2A receptor density and C. albicans infection failed to increase it. In conclusion, this study shows that aged mice have a lower ability to cope with inflammation due to C. albicans over-colonization, associated with an inability to adaptively adjust adenosine A2A receptors density